Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.19■□□□□ 0.82
NDNQ99608 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NDNQ99608 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
NDNQ99608 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDNQ99608 KRT8P36-201ENST00000489121 1440 ntBASIC20.19■□□□□ 0.82
NDNQ99608 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.18■□□□□ 0.82
NDNQ99608 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.18■□□□□ 0.82
NDNQ99608 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.18■□□□□ 0.82
NDNQ99608 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NDNQ99608 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.18■□□□□ 0.82
NDNQ99608 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.18■□□□□ 0.82
NDNQ99608 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NDNQ99608 MFSD11-216ENST00000590393 1141 ntBASIC20.18■□□□□ 0.82
NDNQ99608 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.18■□□□□ 0.82
NDNQ99608 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.18■□□□□ 0.82
NDNQ99608 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDNQ99608 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NDNQ99608 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.17■□□□□ 0.82
NDNQ99608 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.17■□□□□ 0.82
NDNQ99608 AC016769.1-201ENST00000409132 1010 ntBASIC20.17■□□□□ 0.82
NDNQ99608 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.17■□□□□ 0.82
NDNQ99608 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.17■□□□□ 0.82
NDNQ99608 AC016405.3-201ENST00000607710 860 ntBASIC20.17■□□□□ 0.82
NDNQ99608 FAM21FP-204ENST00000608637 956 ntBASIC20.17■□□□□ 0.82
NDNQ99608 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.17■□□□□ 0.82
NDNQ99608 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDNQ99608 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
NDNQ99608 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NDNQ99608 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.16■□□□□ 0.82
NDNQ99608 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NDNQ99608 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NDNQ99608 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 KRT18P11-201ENST00000435214 1283 ntBASIC20.16■□□□□ 0.82
NDNQ99608 AL591742.1-201ENST00000604433 565 ntBASIC20.16■□□□□ 0.82
NDNQ99608 AC011767.1-201ENST00000617410 1153 ntBASIC20.16■□□□□ 0.82
NDNQ99608 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.16■□□□□ 0.82
NDNQ99608 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDNQ99608 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NDNQ99608 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NDNQ99608 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NDNQ99608 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 AL162430.1-201ENST00000480705 870 ntBASIC20.15■□□□□ 0.82
NDNQ99608 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.15■□□□□ 0.82
NDNQ99608 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 AC013268.1-206ENST00000638368 961 ntBASIC20.15■□□□□ 0.82
NDNQ99608 AC112229.1-201ENST00000639295 961 ntBASIC20.15■□□□□ 0.82
NDNQ99608 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.15■□□□□ 0.82
NDNQ99608 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NDNQ99608 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NDNQ99608 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.15■□□□□ 0.82
NDNQ99608 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.15■□□□□ 0.82
NDNQ99608 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
NDNQ99608 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDNQ99608 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.15■□□□□ 0.82
NDNQ99608 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NDNQ99608 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
NDNQ99608 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.14■□□□□ 0.82
NDNQ99608 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDNQ99608 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.14■□□□□ 0.81
NDNQ99608 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDNQ99608 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms