Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 AC233992.3-201ENST00000607491 485 ntBASIC16.32■□□□□ 0.2
RAB40CQ96S21 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RAB40CQ96S21 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40CQ96S21 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 AC245052.3-201ENST00000450182 901 ntBASIC16.31■□□□□ 0.2
RAB40CQ96S21 AL136162.1-201ENST00000607711 1078 ntBASIC16.31■□□□□ 0.2
RAB40CQ96S21 AC105233.4-201ENST00000642045 216 ntBASIC16.31■□□□□ 0.2
RAB40CQ96S21 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40CQ96S21 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 AC004408.2-201ENST00000623613 2777 ntBASIC16.31■□□□□ 0.2
RAB40CQ96S21 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40CQ96S21 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 AC096631.2-201ENST00000436136 790 ntBASIC16.3■□□□□ 0.2
RAB40CQ96S21 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40CQ96S21 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40CQ96S21 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40CQ96S21 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms