Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL590627.1-203ENST00000421194 1026 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 SPDYE15P-201ENST00000424157 909 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 CDV3P1-201ENST00000471403 739 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 AC007274.1-201ENST00000439805 662 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 AP002383.4-201ENST00000442518 975 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 AL121829.2-201ENST00000620908 328 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SPDYE13P-201ENST00000445314 798 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC245052.3-201ENST00000450182 901 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC104819.1-201ENST00000504587 486 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 PRSS44-201ENST00000515154 1146 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC098831.1-202ENST00000438821 336 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 KRT18P31-201ENST00000506277 1292 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 KRT18P58-201ENST00000527480 1120 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 RFPL4AP1-201ENST00000530883 850 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 HLA-G-203ENST00000376818 1127 ntBASIC6.22□□□□□ -1.41
HMCN1Q96RW7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 GK-202ENST00000378941 458 ntTSL 3 BASIC6.22□□□□□ -1.41
HMCN1Q96RW7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms