Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST1H2AAQ96QV6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HIST1H2AAQ96QV6 AC090340.1-201ENST00000620778 4980 ntBASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 AL162430.1-201ENST00000480705 870 ntBASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 AL162412.1-201ENST00000567129 965 ntBASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H2AAQ96QV6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 AC007322.4-201ENST00000509611 723 ntBASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 AC011767.1-201ENST00000617410 1153 ntBASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H2AAQ96QV6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms