Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 NAPSB-206ENST00000562112 1266 ntBASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 AC139887.4-201ENST00000607877 719 ntBASIC17.27■□□□□ 0.35
CSMD1Q96PZ7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSMD1Q96PZ7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 CLEC4GP1-201ENST00000596555 870 ntBASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 CYP21A1P-202ENST00000354927 1481 ntBASIC17.25■□□□□ 0.35
CSMD1Q96PZ7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 AC080038.3-201ENST00000623346 1952 ntBASIC17.24■□□□□ 0.35
CSMD1Q96PZ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 NBPF21P-201ENST00000425093 1451 ntBASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 AC117947.1-201ENST00000427448 529 ntBASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.23■□□□□ 0.35
CSMD1Q96PZ7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms