Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 PTBP1P-201ENST00000554374 1601 ntBASIC16.79■□□□□ 0.28
GAFA1Q96PS6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 AC083880.1-201ENST00000608266 535 ntBASIC16.79■□□□□ 0.28
GAFA1Q96PS6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 AL162377.1-201ENST00000618844 1793 ntBASIC16.79■□□□□ 0.28
GAFA1Q96PS6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAFA1Q96PS6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GAFA1Q96PS6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.77■□□□□ 0.28
GAFA1Q96PS6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GAFA1Q96PS6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
GAFA1Q96PS6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.77■□□□□ 0.27
GAFA1Q96PS6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.77■□□□□ 0.27
GAFA1Q96PS6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
GAFA1Q96PS6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAFA1Q96PS6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GAFA1Q96PS6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms