Protein–RNA interactions for Protein: Q96NL0

RUNDC3B, RUN domain-containing protein 3B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3BQ96NL0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 AP001160.3-201ENST00000601484 763 ntBASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 AL691432.2-201ENST00000607222 2038 ntBASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RUNDC3BQ96NL0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 AC105265.2-201ENST00000467189 838 ntBASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 MIR6084-201ENST00000622012 110 ntBASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RUNDC3BQ96NL0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 AC027612.3-201ENST00000413684 1047 ntBASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 SUDS3P1-201ENST00000505831 966 ntBASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 SLC7A5P1-201ENST00000568957 537 ntBASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.86■□□□□ 0.93
RUNDC3BQ96NL0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 PGM5P4-201ENST00000421970 445 ntBASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 AC104187.1-201ENST00000607510 612 ntBASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RUNDC3BQ96NL0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 RBM17P2-201ENST00000616397 1405 ntBASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 LINC02228-203ENST00000641970 1355 ntBASIC20.84■□□□□ 0.93
RUNDC3BQ96NL0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 AC097381.1-201ENST00000429019 1296 ntBASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 CDV3P1-201ENST00000471403 739 ntBASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RUNDC3BQ96NL0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms