Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.33■□□□□ 0.36
CMTM3Q96MX0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CMTM3Q96MX0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 LINC01465-201ENST00000408887 1940 ntBASIC17.32■□□□□ 0.36
CMTM3Q96MX0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CMTM3Q96MX0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMTM3Q96MX0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.3■□□□□ 0.36
CMTM3Q96MX0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 IGHV3-19-201ENST00000521488 291 ntBASIC17.3■□□□□ 0.36
CMTM3Q96MX0 AC009237.14-201ENST00000609975 1594 ntBASIC17.3■□□□□ 0.36
CMTM3Q96MX0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.3■□□□□ 0.36
CMTM3Q96MX0 KRT16P2-201ENST00000414673 1423 ntBASIC17.3■□□□□ 0.36
CMTM3Q96MX0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms