Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPG11Q96JI7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPG11Q96JI7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPG11Q96JI7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPG11Q96JI7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPG11Q96JI7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.17■□□□□ 0.34
SPG11Q96JI7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 AL390719.1-204ENST00000412397 1219 ntBASIC17.16■□□□□ 0.34
SPG11Q96JI7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 AL137013.1-201ENST00000432946 1228 ntBASIC17.16■□□□□ 0.34
SPG11Q96JI7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPG11Q96JI7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 AC104076.2-201ENST00000448912 469 ntBASIC17.16■□□□□ 0.34
SPG11Q96JI7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SPG11Q96JI7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 KSR1P1-201ENST00000446298 240 ntBASIC17.15■□□□□ 0.34
SPG11Q96JI7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.15■□□□□ 0.34
SPG11Q96JI7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPG11Q96JI7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SPG11Q96JI7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 AC027702.1-201ENST00000563810 1770 ntBASIC17.14■□□□□ 0.33
SPG11Q96JI7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPG11Q96JI7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPG11Q96JI7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPG11Q96JI7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPG11Q96JI7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.14■□□□□ 0.33
SPG11Q96JI7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPG11Q96JI7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPG11Q96JI7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 KRT18P56-201ENST00000507275 550 ntBASIC17.13■□□□□ 0.33
SPG11Q96JI7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 AC026271.3-201ENST00000571884 352 ntBASIC17.13■□□□□ 0.33
SPG11Q96JI7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms