Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC008687.6-201ENST00000596318 630 ntBASIC16.95■□□□□ 0.3
TIMD4Q96H15 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 AC073648.6-201ENST00000641589 218 ntBASIC16.95■□□□□ 0.3
TIMD4Q96H15 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMD4Q96H15 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMD4Q96H15 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 AP006294.2-201ENST00000641667 209 ntBASIC16.94■□□□□ 0.3
TIMD4Q96H15 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMD4Q96H15 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.94■□□□□ 0.3
TIMD4Q96H15 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMD4Q96H15 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 POM121L13P-201ENST00000422362 380 ntBASIC16.93■□□□□ 0.3
TIMD4Q96H15 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.93■□□□□ 0.3
TIMD4Q96H15 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 AC142381.4-202ENST00000563973 229 ntBASIC16.93■□□□□ 0.3
TIMD4Q96H15 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 AC008403.3-201ENST00000598924 454 ntBASIC16.93■□□□□ 0.3
TIMD4Q96H15 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMD4Q96H15 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TIMD4Q96H15 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TIMD4Q96H15 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TIMD4Q96H15 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms