Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 TREX1-205ENST00000625293 1783 ntBASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP6Q96FZ7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 AC011298.3-201ENST00000615796 283 ntBASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP6Q96FZ7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 AC136469.2-201ENST00000623944 1028 ntBASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP6Q96FZ7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 AC055733.4-201ENST00000638462 1354 ntBASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 UNC93B3-201ENST00000308076 687 ntBASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms