Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 AL020996.1-203ENST00000536896 2307 ntBASIC17.46■□□□□ 0.39
CPNE2Q96FN4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 CDV3P1-201ENST00000471403 739 ntBASIC17.46■□□□□ 0.39
CPNE2Q96FN4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
CPNE2Q96FN4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE2Q96FN4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 AC097381.1-201ENST00000429019 1296 ntBASIC17.45■□□□□ 0.38
CPNE2Q96FN4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE2Q96FN4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE2Q96FN4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 AC099778.1-201ENST00000568593 1911 ntBASIC17.43■□□□□ 0.38
CPNE2Q96FN4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 SLC7A5P2-201ENST00000553010 536 ntBASIC17.43■□□□□ 0.38
CPNE2Q96FN4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE2Q96FN4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms