Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
TRIM11Q96F44 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TRIM11Q96F44 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.32■■□□□ 1
TRIM11Q96F44 BX119927.1-201ENST00000636596 1552 ntBASIC21.32■■□□□ 1
TRIM11Q96F44 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.32■■□□□ 1
TRIM11Q96F44 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.32■■□□□ 1
TRIM11Q96F44 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.32■■□□□ 1
TRIM11Q96F44 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRIM11Q96F44 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 AC231657.2-201ENST00000624556 255 ntBASIC21.32■■□□□ 1
TRIM11Q96F44 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.32■■□□□ 1
TRIM11Q96F44 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TRIM11Q96F44 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM11Q96F44 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.32■■□□□ 1
TRIM11Q96F44 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
TRIM11Q96F44 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.31■■□□□ 1
TRIM11Q96F44 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.31■■□□□ 1
TRIM11Q96F44 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.31■■□□□ 1
TRIM11Q96F44 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.31■■□□□ 1
TRIM11Q96F44 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 AL162430.1-201ENST00000480705 870 ntBASIC21.31■■□□□ 1
TRIM11Q96F44 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.31■■□□□ 1
TRIM11Q96F44 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM11Q96F44 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.3■■□□□ 1
TRIM11Q96F44 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRIM11Q96F44 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRIM11Q96F44 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.3■■□□□ 1
TRIM11Q96F44 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.3■■□□□ 1
TRIM11Q96F44 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.3■■□□□ 1
TRIM11Q96F44 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.3■■□□□ 1
TRIM11Q96F44 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.3■■□□□ 1
TRIM11Q96F44 AC008694.1-202ENST00000636953 945 ntBASIC21.3■■□□□ 1
TRIM11Q96F44 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.3■■□□□ 1
TRIM11Q96F44 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM11Q96F44 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.29■■□□□ 1
TRIM11Q96F44 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
TRIM11Q96F44 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.29■■□□□ 1
TRIM11Q96F44 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 CYP2T1P-201ENST00000432607 1285 ntBASIC21.29■■□□□ 1
TRIM11Q96F44 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.29■■□□□ 1
TRIM11Q96F44 AC105020.6-201ENST00000621523 1217 ntBASIC21.29■■□□□ 1
TRIM11Q96F44 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.29■■□□□ 1
TRIM11Q96F44 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM11Q96F44 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms