Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF25Q96BH1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
RNF25Q96BH1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF25Q96BH1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF25Q96BH1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF25Q96BH1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF25Q96BH1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF25Q96BH1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF25Q96BH1 KRT18P5-201ENST00000436075 1291 ntBASIC21.14■□□□□ 0.97
RNF25Q96BH1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF25Q96BH1 FAM21FP-204ENST00000608637 956 ntBASIC21.14■□□□□ 0.97
RNF25Q96BH1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF25Q96BH1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF25Q96BH1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF25Q96BH1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF25Q96BH1 DPP3P2-201ENST00000416030 1696 ntBASIC21.12■□□□□ 0.97
RNF25Q96BH1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF25Q96BH1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF25Q96BH1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.12■□□□□ 0.97
RNF25Q96BH1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF25Q96BH1 AC137761.2-201ENST00000561729 223 ntBASIC21.12■□□□□ 0.97
RNF25Q96BH1 AC145350.3-201ENST00000569033 163 ntBASIC21.12■□□□□ 0.97
RNF25Q96BH1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RNF25Q96BH1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF25Q96BH1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF25Q96BH1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 AL591742.1-201ENST00000604433 565 ntBASIC21.11■□□□□ 0.97
RNF25Q96BH1 TCF3P1-201ENST00000423021 1937 ntBASIC21.11■□□□□ 0.97
RNF25Q96BH1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 AC087289.5-201ENST00000586076 3175 ntBASIC21.11■□□□□ 0.97
RNF25Q96BH1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF25Q96BH1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF25Q96BH1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF25Q96BH1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF25Q96BH1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF25Q96BH1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF25Q96BH1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF25Q96BH1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 AC026271.2-201ENST00000428091 497 ntBASIC21.1■□□□□ 0.97
RNF25Q96BH1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
RNF25Q96BH1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF25Q96BH1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms