Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFT1Q96AA3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFT1Q96AA3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.8■□□□□ 0.44
RFT1Q96AA3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFT1Q96AA3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFT1Q96AA3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFT1Q96AA3 AC142381.2-201ENST00000566120 298 ntBASIC17.79■□□□□ 0.44
RFT1Q96AA3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFT1Q96AA3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
RFT1Q96AA3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 EEF1DP3-203ENST00000566025 782 ntBASIC17.78■□□□□ 0.44
RFT1Q96AA3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 TPRG1LP1-201ENST00000598702 760 ntBASIC17.78■□□□□ 0.44
RFT1Q96AA3 AL139246.5-201ENST00000606645 996 ntBASIC17.78■□□□□ 0.44
RFT1Q96AA3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.78■□□□□ 0.44
RFT1Q96AA3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFT1Q96AA3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 AC053503.5-201ENST00000601508 636 ntBASIC17.77■□□□□ 0.44
RFT1Q96AA3 AL354811.1-201ENST00000610286 706 ntBASIC17.77■□□□□ 0.44
RFT1Q96AA3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFT1Q96AA3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFT1Q96AA3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFT1Q96AA3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
RFT1Q96AA3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFT1Q96AA3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFT1Q96AA3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFT1Q96AA3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFT1Q96AA3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RFT1Q96AA3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 AP004607.4-201ENST00000530158 1459 ntBASIC17.76■□□□□ 0.43
RFT1Q96AA3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 AL158211.5-201ENST00000623583 2518 ntBASIC17.76■□□□□ 0.43
RFT1Q96AA3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFT1Q96AA3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RFT1Q96AA3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms