Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.39■□□□□ 0.7
UBE2E3Q969T4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 AF201337.1-201ENST00000520239 748 ntBASIC19.39■□□□□ 0.69
UBE2E3Q969T4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2E3Q969T4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2E3Q969T4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 SMG8-203ENST00000578922 2178 ntBASIC19.37■□□□□ 0.69
UBE2E3Q969T4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 MIR663A-201ENST00000385250 93 ntBASIC19.37■□□□□ 0.69
UBE2E3Q969T4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 AC093787.1-201ENST00000450396 207 ntBASIC19.37■□□□□ 0.69
UBE2E3Q969T4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.37■□□□□ 0.69
UBE2E3Q969T4 RAP2CP1-201ENST00000605103 478 ntBASIC19.37■□□□□ 0.69
UBE2E3Q969T4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2E3Q969T4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 LSM12P1-201ENST00000411836 588 ntBASIC19.36■□□□□ 0.69
UBE2E3Q969T4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 AL355472.2-201ENST00000422958 438 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms