Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 C11orf96-202ENST00000528572 1834 ntBASIC17.85■□□□□ 0.45
GCN1Q92616 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.84■□□□□ 0.45
GCN1Q92616 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCN1Q92616 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCN1Q92616 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GCN1Q92616 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.84■□□□□ 0.45
GCN1Q92616 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.84■□□□□ 0.45
GCN1Q92616 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GCN1Q92616 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GCN1Q92616 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.84■□□□□ 0.45
GCN1Q92616 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GCN1Q92616 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.84■□□□□ 0.45
GCN1Q92616 HLA-J-202ENST00000469281 1241 ntBASIC17.84■□□□□ 0.45
GCN1Q92616 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.84■□□□□ 0.45
GCN1Q92616 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.84■□□□□ 0.45
GCN1Q92616 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GCN1Q92616 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GCN1Q92616 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GCN1Q92616 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
GCN1Q92616 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.83■□□□□ 0.44
GCN1Q92616 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
GCN1Q92616 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
GCN1Q92616 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GCN1Q92616 AL136038.3-201ENST00000561909 1096 ntBASIC17.83■□□□□ 0.44
GCN1Q92616 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.83■□□□□ 0.44
GCN1Q92616 HYMAI.1-201ENST00000620949 238 ntBASIC17.83■□□□□ 0.44
GCN1Q92616 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.83■□□□□ 0.44
GCN1Q92616 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GCN1Q92616 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.82■□□□□ 0.44
GCN1Q92616 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 HTR5BP-201ENST00000430851 1154 ntBASIC17.82■□□□□ 0.44
GCN1Q92616 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.82■□□□□ 0.44
GCN1Q92616 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.82■□□□□ 0.44
GCN1Q92616 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.82■□□□□ 0.44
GCN1Q92616 AC141257.4-201ENST00000634557 245 ntBASIC17.82■□□□□ 0.44
GCN1Q92616 AC136944.6-201ENST00000634818 245 ntBASIC17.82■□□□□ 0.44
GCN1Q92616 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.82■□□□□ 0.44
GCN1Q92616 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GCN1Q92616 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
GCN1Q92616 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GCN1Q92616 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GCN1Q92616 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
GCN1Q92616 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.82■□□□□ 0.44
GCN1Q92616 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.82■□□□□ 0.44
GCN1Q92616 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 MRPL3P1-201ENST00000400109 1033 ntBASIC17.81■□□□□ 0.44
GCN1Q92616 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.81■□□□□ 0.44
GCN1Q92616 RNA5SP419-201ENST00000515908 135 ntBASIC17.81■□□□□ 0.44
GCN1Q92616 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.81■□□□□ 0.44
GCN1Q92616 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GCN1Q92616 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
GCN1Q92616 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.8■□□□□ 0.44
GCN1Q92616 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.8■□□□□ 0.44
GCN1Q92616 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 AC079781.3-201ENST00000449110 356 ntBASIC17.8■□□□□ 0.44
GCN1Q92616 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.8■□□□□ 0.44
GCN1Q92616 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.8■□□□□ 0.44
GCN1Q92616 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
GCN1Q92616 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.8■□□□□ 0.44
GCN1Q92616 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.8■□□□□ 0.44
GCN1Q92616 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GCN1Q92616 BX842568.4-201ENST00000421222 227 ntBASIC17.8■□□□□ 0.44
GCN1Q92616 AC007663.1-201ENST00000438948 1240 ntBASIC17.8■□□□□ 0.44
GCN1Q92616 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.8■□□□□ 0.44
GCN1Q92616 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.8■□□□□ 0.44
GCN1Q92616 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.8■□□□□ 0.44
GCN1Q92616 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.8■□□□□ 0.44
GCN1Q92616 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.8■□□□□ 0.44
GCN1Q92616 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GCN1Q92616 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms