Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 Z98882.1-201ENST00000622160 2253 ntBASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF4Q8WZA2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 AC073195.1-201ENST00000607241 877 ntBASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.58■■□□□ 1.85
RAPGEF4Q8WZA2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
RAPGEF4Q8WZA2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.58■■□□□ 1.84
RAPGEF4Q8WZA2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
RAPGEF4Q8WZA2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 MMP23A-201ENST00000234610 1017 ntBASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RAPGEF4Q8WZA2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 AC004264.1-201ENST00000608354 794 ntBASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RAPGEF4Q8WZA2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAPGEF4Q8WZA2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAPGEF4Q8WZA2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 AC121338.2-201ENST00000622535 1744 ntBASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
RAPGEF4Q8WZA2 HLA-G-202ENST00000376815 851 ntBASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 HLA-G-203ENST00000376818 1127 ntBASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RAPGEF4Q8WZA2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
RAPGEF4Q8WZA2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 AP002982.1-201ENST00000492365 877 ntBASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms