Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF139Q8WU17 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF139Q8WU17 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF139Q8WU17 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF139Q8WU17 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF139Q8WU17 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF139Q8WU17 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF139Q8WU17 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF139Q8WU17 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF139Q8WU17 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF139Q8WU17 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF139Q8WU17 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF139Q8WU17 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF139Q8WU17 HLA-B-256ENST00000639848 1089 ntBASIC21.16■□□□□ 0.98
RNF139Q8WU17 AC073314.1-201ENST00000568729 2216 ntBASIC21.16■□□□□ 0.98
RNF139Q8WU17 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF139Q8WU17 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF139Q8WU17 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF139Q8WU17 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF139Q8WU17 AC060766.5-201ENST00000590539 871 ntBASIC21.15■□□□□ 0.98
RNF139Q8WU17 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF139Q8WU17 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF139Q8WU17 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
RNF139Q8WU17 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF139Q8WU17 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF139Q8WU17 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF139Q8WU17 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF139Q8WU17 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF139Q8WU17 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF139Q8WU17 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF139Q8WU17 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
RNF139Q8WU17 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF139Q8WU17 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 AC092368.3-202ENST00000574180 1591 ntBASIC21.14■□□□□ 0.97
RNF139Q8WU17 AP005212.1-201ENST00000581547 1997 ntBASIC21.14■□□□□ 0.97
RNF139Q8WU17 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF139Q8WU17 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF139Q8WU17 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF139Q8WU17 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RNF139Q8WU17 LINC01006-201ENST00000333319 2292 ntBASIC21.12■□□□□ 0.97
RNF139Q8WU17 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms