Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 MIR2861-201ENST00000636310 90 ntBASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNIH3Q8TBE1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.39■□□□□ 0.54
CNIH3Q8TBE1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNIH3Q8TBE1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNIH3Q8TBE1 Z82202.1-201ENST00000623446 1880 ntBASIC18.39■□□□□ 0.54
CNIH3Q8TBE1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNIH3Q8TBE1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 DUX4L19-201ENST00000557448 1267 ntBASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CNIH3Q8TBE1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNIH3Q8TBE1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 LETM1P2-201ENST00000597330 2178 ntBASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 EEF1DP3-203ENST00000566025 782 ntBASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 DPP3P2-201ENST00000416030 1696 ntBASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNIH3Q8TBE1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNIH3Q8TBE1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.36■□□□□ 0.53
CNIH3Q8TBE1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNIH3Q8TBE1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms