Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP43Q8NFH3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 KRT18P68-201ENST00000392293 1000 ntBASIC18.88■□□□□ 0.61
NUP43Q8NFH3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 AC005181.1-201ENST00000604782 1256 ntBASIC18.88■□□□□ 0.61
NUP43Q8NFH3 OR10C1-204ENST00000622521 1039 ntBASIC18.88■□□□□ 0.61
NUP43Q8NFH3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NUP43Q8NFH3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 AC073111.5-205ENST00000641717 521 ntBASIC18.87■□□□□ 0.61
NUP43Q8NFH3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP43Q8NFH3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 AL355472.2-201ENST00000422958 438 ntBASIC18.86■□□□□ 0.61
NUP43Q8NFH3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 CYP2T3P-201ENST00000601990 817 ntBASIC18.86■□□□□ 0.61
NUP43Q8NFH3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP43Q8NFH3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 AC105020.6-201ENST00000621523 1217 ntBASIC18.85■□□□□ 0.61
NUP43Q8NFH3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
NUP43Q8NFH3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms