Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 AC004854.2-201ENST00000608450 1441 ntBASIC15.93■□□□□ 0.14
TMEM116Q8NCL8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM116Q8NCL8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM116Q8NCL8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM116Q8NCL8 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 KRT19P1-201ENST00000405746 1186 ntBASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 TCF3P1-201ENST00000423021 1937 ntBASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TMEM116Q8NCL8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 AC091799.1-201ENST00000422823 811 ntBASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 RBM17P2-201ENST00000616397 1405 ntBASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM116Q8NCL8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 AC007322.3-201ENST00000426526 701 ntBASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 AC087623.3-201ENST00000607047 1098 ntBASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM116Q8NCL8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 KRT8P36-201ENST00000489121 1440 ntBASIC15.89■□□□□ 0.13
TMEM116Q8NCL8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms