Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 C1QBPP2-201ENST00000528754 825 ntBASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 AL356652.1-201ENST00000615962 565 ntBASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 LINC01521-201ENST00000504184 1943 ntBASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF2Q8N3S3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF2Q8N3S3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 PGM5P4-201ENST00000421970 445 ntBASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF2Q8N3S3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
PHTF2Q8N3S3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF2Q8N3S3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF2Q8N3S3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF2Q8N3S3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF2Q8N3S3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF2Q8N3S3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 AC092667.1-201ENST00000434301 2586 ntBASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.82■□□□□ 0.92
PHTF2Q8N3S3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms