Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 AC104076.2-201ENST00000448912 469 ntBASIC28.24■■■□□ 2.11
XRN1Q8IZH2 MYC-208ENST00000641036 567 ntBASIC28.24■■■□□ 2.11
XRN1Q8IZH2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC28.24■■■□□ 2.11
XRN1Q8IZH2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 AC022616.7-201ENST00000525383 220 ntBASIC28.23■■■□□ 2.11
XRN1Q8IZH2 DGCR10-201ENST00000609839 495 ntBASIC28.23■■■□□ 2.11
XRN1Q8IZH2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 AC011484.1-201ENST00000377652 1995 ntBASIC28.23■■■□□ 2.11
XRN1Q8IZH2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
XRN1Q8IZH2 AC242852.2-201ENST00000615738 1807 ntBASIC28.22■■■□□ 2.11
XRN1Q8IZH2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 AL137013.1-201ENST00000432946 1228 ntBASIC28.22■■■□□ 2.11
XRN1Q8IZH2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 AC027702.1-201ENST00000563810 1770 ntBASIC28.22■■■□□ 2.11
XRN1Q8IZH2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC28.22■■■□□ 2.11
XRN1Q8IZH2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC28.21■■■□□ 2.11
XRN1Q8IZH2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRN1Q8IZH2 AP005242.2-201ENST00000580065 1175 ntBASIC28.21■■■□□ 2.11
XRN1Q8IZH2 ABBA01031674.1-201ENST00000635145 728 ntBASIC28.21■■■□□ 2.11
XRN1Q8IZH2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.2■■■□□ 2.11
XRN1Q8IZH2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
XRN1Q8IZH2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
XRN1Q8IZH2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
XRN1Q8IZH2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.1
XRN1Q8IZH2 C2orf69P3-201ENST00000565542 1120 ntBASIC28.2■■■□□ 2.1
XRN1Q8IZH2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC28.2■■■□□ 2.1
XRN1Q8IZH2 CR392000.1-201ENST00000624770 1228 ntBASIC28.2■■■□□ 2.1
XRN1Q8IZH2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
XRN1Q8IZH2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
XRN1Q8IZH2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms