Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 KRT16P1-201ENST00000399124 1418 ntBASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL27A1Q8IZC6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AP000525.1-201ENST00000608286 694 ntBASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 Z98882.1-201ENST00000622160 2253 ntBASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AL355355.2-201ENST00000442321 338 ntBASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 AC073195.1-201ENST00000607241 877 ntBASIC19.16■□□□□ 0.66
COL27A1Q8IZC6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL27A1Q8IZC6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL27A1Q8IZC6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL27A1Q8IZC6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL27A1Q8IZC6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL27A1Q8IZC6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL27A1Q8IZC6 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 C1QL1P1-201ENST00000568105 661 ntBASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 AC005521.1-201ENST00000393351 872 ntBASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 KRT18P57-201ENST00000443599 1254 ntBASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.14■□□□□ 0.65
COL27A1Q8IZC6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 AC010947.1-201ENST00000623454 693 ntBASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL27A1Q8IZC6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms