Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC116Q8IYX3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC116Q8IYX3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC116Q8IYX3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC116Q8IYX3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC116Q8IYX3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC116Q8IYX3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 CROCCP5-201ENST00000436658 830 ntBASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC116Q8IYX3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 AC099778.1-201ENST00000568593 1911 ntBASIC19■□□□□ 0.63
CCDC116Q8IYX3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 MIR663A-201ENST00000385250 93 ntBASIC19■□□□□ 0.63
CCDC116Q8IYX3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 AC133552.2-202ENST00000575694 574 ntBASIC19■□□□□ 0.63
CCDC116Q8IYX3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC116Q8IYX3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19■□□□□ 0.63
CCDC116Q8IYX3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 SLC25A24-204ENST00000569674 2357 ntBASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC116Q8IYX3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 AF201337.1-201ENST00000520239 748 ntBASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 AC105036.2-201ENST00000569468 176 ntBASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 AC105020.6-201ENST00000621523 1217 ntBASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC116Q8IYX3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms