Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 AL121829.2-201ENST00000620908 328 ntBASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEFF1Q8IYR6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 FAM197Y1-201ENST00000421178 764 ntBASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 KRT16P5-201ENST00000455284 522 ntBASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 RN7SL850P-201ENST00000579959 291 ntBASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 AL445228.2-201ENST00000605589 952 ntBASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEFF1Q8IYR6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 NBPF21P-201ENST00000425093 1451 ntBASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEFF1Q8IYR6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 LINC00565-201ENST00000562710 2331 ntBASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TMEFF1Q8IYR6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.08■□□□□ 0.81
TMEFF1Q8IYR6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEFF1Q8IYR6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEFF1Q8IYR6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEFF1Q8IYR6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEFF1Q8IYR6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.08■□□□□ 0.8
TMEFF1Q8IYR6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEFF1Q8IYR6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms