Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 AC011767.1-201ENST00000617410 1153 ntBASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00346Q8IVM7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 TCF3P1-201ENST00000423021 1937 ntBASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00346Q8IVM7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 AL356652.1-201ENST00000615962 565 ntBASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 CYP21A1P-202ENST00000354927 1481 ntBASIC17.82■□□□□ 0.44
LINC00346Q8IVM7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 AC087633.2-202ENST00000565166 1439 ntBASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 AL162430.1-201ENST00000480705 870 ntBASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 AC007322.4-201ENST00000509611 723 ntBASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00346Q8IVM7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 AIRN-201ENST00000601203 4374 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms