Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCA5Q86VQ0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 AC105265.2-201ENST00000467189 838 ntBASIC20.05■□□□□ 0.8
LCA5Q86VQ0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 SMG8-203ENST00000578922 2178 ntBASIC20.05■□□□□ 0.8
LCA5Q86VQ0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 AC026471.1-201ENST00000564629 3026 ntBASIC20.05■□□□□ 0.8
LCA5Q86VQ0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.05■□□□□ 0.8
LCA5Q86VQ0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.04■□□□□ 0.8
LCA5Q86VQ0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 TERF1P2-201ENST00000583350 1212 ntBASIC20.04■□□□□ 0.8
LCA5Q86VQ0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCA5Q86VQ0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.03■□□□□ 0.8
LCA5Q86VQ0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 TMEM179-206ENST00000616017 1645 ntBASIC20.02■□□□□ 0.8
LCA5Q86VQ0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 AC097381.1-201ENST00000429019 1296 ntBASIC20.02■□□□□ 0.8
LCA5Q86VQ0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCA5Q86VQ0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.02■□□□□ 0.79
LCA5Q86VQ0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms