Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 AC004854.2-201ENST00000608450 1441 ntBASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MRPL55Q7Z7F7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 SLC7A5P1-201ENST00000568957 537 ntBASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 AC243732.1-201ENST00000612648 864 ntBASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MRPL55Q7Z7F7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 AC007322.3-201ENST00000426526 701 ntBASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 MIR2861-201ENST00000636310 90 ntBASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 AL512408.1-201ENST00000569378 2000 ntBASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL55Q7Z7F7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms