Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 AC004263.2-201ENST00000617183 678 ntBASIC17.15■□□□□ 0.34
CSMD2Q7Z408 AC093458.2-201ENST00000623150 629 ntBASIC17.15■□□□□ 0.34
CSMD2Q7Z408 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD2Q7Z408 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CSMD2Q7Z408 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 KRT16P1-201ENST00000399124 1418 ntBASIC17.14■□□□□ 0.33
CSMD2Q7Z408 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 FAM99A-202ENST00000538190 1989 ntBASIC17.14■□□□□ 0.33
CSMD2Q7Z408 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 MESTP1-201ENST00000404287 994 ntBASIC17.14■□□□□ 0.33
CSMD2Q7Z408 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 AC139887.4-201ENST00000607877 719 ntBASIC17.14■□□□□ 0.33
CSMD2Q7Z408 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD2Q7Z408 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.13■□□□□ 0.33
CSMD2Q7Z408 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD2Q7Z408 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 AC117947.1-201ENST00000427448 529 ntBASIC17.12■□□□□ 0.33
CSMD2Q7Z408 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 GPALPP1-207ENST00000611650 899 ntBASIC17.12■□□□□ 0.33
CSMD2Q7Z408 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 NIFKP9-201ENST00000419265 221 ntBASIC17.12■□□□□ 0.33
CSMD2Q7Z408 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.12■□□□□ 0.33
CSMD2Q7Z408 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 AC091390.4-202ENST00000476426 537 ntBASIC17.12■□□□□ 0.33
CSMD2Q7Z408 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 AC023511.2-201ENST00000618803 211 ntBASIC17.12■□□□□ 0.33
CSMD2Q7Z408 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
CSMD2Q7Z408 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 AC004264.1-201ENST00000608354 794 ntBASIC17.11■□□□□ 0.33
CSMD2Q7Z408 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD2Q7Z408 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms