Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 AP000974.1-201ENST00000623909 2387 ntBASIC18.55■□□□□ 0.56
TUBA1AQ71U36 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
TUBA1AQ71U36 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 IKBKGP1-201ENST00000612193 1073 ntBASIC18.54■□□□□ 0.56
TUBA1AQ71U36 AC092666.2-201ENST00000613287 246 ntBASIC18.54■□□□□ 0.56
TUBA1AQ71U36 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1AQ71U36 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 AC022517.1-201ENST00000592429 346 ntBASIC18.53■□□□□ 0.56
TUBA1AQ71U36 AC121338.2-201ENST00000622535 1744 ntBASIC18.53■□□□□ 0.56
TUBA1AQ71U36 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1AQ71U36 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.52■□□□□ 0.56
TUBA1AQ71U36 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TUBA1AQ71U36 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.52■□□□□ 0.55
TUBA1AQ71U36 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBA1AQ71U36 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.52■□□□□ 0.55
TUBA1AQ71U36 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
TUBA1AQ71U36 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms