Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 LSM12P1-201ENST00000411836 588 ntBASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 GUSBP6-202ENST00000438529 1198 ntBASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 BX276092.2-201ENST00000417668 665 ntBASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 TCF3P1-201ENST00000423021 1937 ntBASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA1Q6ZS62 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 AL391422.3-201ENST00000603791 2761 ntBASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 MIPEPP3-201ENST00000412105 444 ntBASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 TSPY6P-201ENST00000448518 926 ntBASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 KRT8P17-201ENST00000453110 1448 ntBASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA1Q6ZS62 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 GPX1P1-201ENST00000388829 606 ntBASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 AC023632.3-201ENST00000521633 145 ntBASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 AC092118.2-201ENST00000613495 667 ntBASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.36■□□□□ 0.37
COLCA1Q6ZS62 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms