Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 AF106564.1-201ENST00000607058 2553 ntBASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 AC007375.3-201ENST00000600936 2314 ntBASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 AC133681.1-201ENST00000465482 601 ntBASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 AL023875.1-201ENST00000640777 796 ntBASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.61■■□□□ 1.05
DCLRE1AQ6PJP8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DCLRE1AQ6PJP8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 MIR718-201ENST00000390190 70 ntBASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 AC124016.1-201ENST00000609552 612 ntBASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DCLRE1AQ6PJP8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.58■■□□□ 1.05
DCLRE1AQ6PJP8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.58■■□□□ 1.04
DCLRE1AQ6PJP8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DCLRE1AQ6PJP8 AL121603.2-201ENST00000557373 2117 ntBASIC21.58■■□□□ 1.04
DCLRE1AQ6PJP8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DCLRE1AQ6PJP8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.58■■□□□ 1.04
DCLRE1AQ6PJP8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DCLRE1AQ6PJP8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 AC239809.2-201ENST00000415381 517 ntBASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DCLRE1AQ6PJP8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms