Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NIPAL3Q6P499 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.34■□□□□ 0.53
NIPAL3Q6P499 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.33■□□□□ 0.53
NIPAL3Q6P499 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NIPAL3Q6P499 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NIPAL3Q6P499 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.33■□□□□ 0.53
NIPAL3Q6P499 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NIPAL3Q6P499 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 CDV3P1-201ENST00000471403 739 ntBASIC18.33■□□□□ 0.52
NIPAL3Q6P499 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 AC231657.2-201ENST00000624556 255 ntBASIC18.33■□□□□ 0.52
NIPAL3Q6P499 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NIPAL3Q6P499 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 AC007322.1-201ENST00000426983 750 ntBASIC18.32■□□□□ 0.52
NIPAL3Q6P499 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NIPAL3Q6P499 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 AC007322.3-201ENST00000426526 701 ntBASIC18.31■□□□□ 0.52
NIPAL3Q6P499 CNN2P6-201ENST00000439038 900 ntBASIC18.31■□□□□ 0.52
NIPAL3Q6P499 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 AC007322.4-201ENST00000509611 723 ntBASIC18.31■□□□□ 0.52
NIPAL3Q6P499 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 AL591742.1-201ENST00000604433 565 ntBASIC18.31■□□□□ 0.52
NIPAL3Q6P499 AC073111.5-205ENST00000641717 521 ntBASIC18.31■□□□□ 0.52
NIPAL3Q6P499 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NIPAL3Q6P499 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
NIPAL3Q6P499 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms