Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 AL032819.2-201ENST00000624543 2162 ntBASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 AC010141.2-201ENST00000452426 721 ntBASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 AP001160.3-201ENST00000601484 763 ntBASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEM53Q6P2H8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 Z98882.1-201ENST00000622160 2253 ntBASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM53Q6P2H8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 AP000974.1-201ENST00000623909 2387 ntBASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM53Q6P2H8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM53Q6P2H8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms