Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 AP005242.2-201ENST00000580065 1175 ntBASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 FSCN1P1-201ENST00000568912 1481 ntBASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PTCRAQ6ISU1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 AC091390.4-202ENST00000476426 537 ntBASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 FAM87A-204ENST00000613235 858 ntBASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
PTCRAQ6ISU1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 RNF152P1-201ENST00000397754 604 ntBASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.91■□□□□ 0.94
PTCRAQ6ISU1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 FAM99A-202ENST00000538190 1989 ntBASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 AC139887.4-201ENST00000607877 719 ntBASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCRAQ6ISU1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTCRAQ6ISU1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
PTCRAQ6ISU1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.89■□□□□ 0.94
PTCRAQ6ISU1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PTCRAQ6ISU1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 MESTP1-201ENST00000404287 994 ntBASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 AC093458.2-201ENST00000623150 629 ntBASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCRAQ6ISU1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms