Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.2■□□□□ 0.5
RTL6Q6ICC9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 POM121L13P-201ENST00000422362 380 ntBASIC18.19■□□□□ 0.5
RTL6Q6ICC9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 AC008550.1-201ENST00000511500 884 ntBASIC18.19■□□□□ 0.5
RTL6Q6ICC9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 AL356652.1-201ENST00000615962 565 ntBASIC18.19■□□□□ 0.5
RTL6Q6ICC9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RTL6Q6ICC9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 PGM5P4-201ENST00000421970 445 ntBASIC18.18■□□□□ 0.5
RTL6Q6ICC9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL6Q6ICC9 FEM1AP4-201ENST00000443167 1987 ntBASIC18.17■□□□□ 0.5
RTL6Q6ICC9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.17■□□□□ 0.5
RTL6Q6ICC9 FAM197Y4-202ENST00000622692 608 ntBASIC18.17■□□□□ 0.5
RTL6Q6ICC9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.17■□□□□ 0.5
RTL6Q6ICC9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL6Q6ICC9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms