Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 AC113347.1-201ENST00000413321 391 ntBASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 AP000525.1-201ENST00000608286 694 ntBASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC30.81■■■□□ 2.52
CDC42BPAQ5VT25 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 AL355355.2-201ENST00000442321 338 ntBASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 AL031963.3-201ENST00000606441 850 ntBASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPAQ5VT25 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 MMP23A-201ENST00000234610 1017 ntBASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 UNC93B2-201ENST00000285383 730 ntBASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 AC073195.1-201ENST00000607241 877 ntBASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPAQ5VT25 KRT16P1-201ENST00000399124 1418 ntBASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 AC092865.7-201ENST00000641832 219 ntBASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.78■■■□□ 2.52
CDC42BPAQ5VT25 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 AC116562.2-201ENST00000507042 360 ntBASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 C1QL1P1-201ENST00000568105 661 ntBASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPAQ5VT25 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPAQ5VT25 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPAQ5VT25 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 AL024507.2-201ENST00000606070 2574 ntBASIC30.74■■■□□ 2.51
CDC42BPAQ5VT25 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 GLDC-219ENST00000640208 420 ntTSL 2 BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC30.73■■■□□ 2.51
CDC42BPAQ5VT25 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPAQ5VT25 H19-201ENST00000411754 1788 ntTSL 5 BASIC30.72■■■□□ 2.51
CDC42BPAQ5VT25 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.72■■■□□ 2.51
CDC42BPAQ5VT25 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
CDC42BPAQ5VT25 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPAQ5VT25 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPAQ5VT25 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms