Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 AL390955.1-201ENST00000428694 934 ntBASIC25.61■■□□□ 1.69
RC3H1Q5TC82 KRT18P57-201ENST00000443599 1254 ntBASIC25.61■■□□□ 1.69
RC3H1Q5TC82 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 CR392000.1-201ENST00000624770 1228 ntBASIC25.61■■□□□ 1.69
RC3H1Q5TC82 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 AL137013.1-201ENST00000432946 1228 ntBASIC25.6■■□□□ 1.69
RC3H1Q5TC82 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 KRT16P1-201ENST00000399124 1418 ntBASIC25.6■■□□□ 1.69
RC3H1Q5TC82 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.6■■□□□ 1.69
RC3H1Q5TC82 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 SLC25A3P1-201ENST00000443844 931 ntBASIC25.59■■□□□ 1.69
RC3H1Q5TC82 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RC3H1Q5TC82 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.58■■□□□ 1.69
RC3H1Q5TC82 PTBP1P-201ENST00000554374 1601 ntBASIC25.58■■□□□ 1.69
RC3H1Q5TC82 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.58■■□□□ 1.68
RC3H1Q5TC82 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RC3H1Q5TC82 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 HLA-G-202ENST00000376815 851 ntBASIC25.56■■□□□ 1.68
RC3H1Q5TC82 HLA-G-203ENST00000376818 1127 ntBASIC25.56■■□□□ 1.68
RC3H1Q5TC82 AC104076.2-201ENST00000448912 469 ntBASIC25.56■■□□□ 1.68
RC3H1Q5TC82 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H1Q5TC82 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 DUX4L26-201ENST00000489078 1255 ntBASIC25.55■■□□□ 1.68
RC3H1Q5TC82 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms