Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM35AQ53FP2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TMEM35AQ53FP2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 GUSBP6-202ENST00000438529 1198 ntBASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TMEM35AQ53FP2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 MIR4758-201ENST00000577688 71 ntBASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 PTBP1P-201ENST00000554374 1601 ntBASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM35AQ53FP2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TMEM35AQ53FP2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35AQ53FP2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35AQ53FP2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35AQ53FP2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35AQ53FP2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35AQ53FP2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TMEM35AQ53FP2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
TMEM35AQ53FP2 AC099778.1-201ENST00000568593 1911 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms