Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CACNA1EQ15878 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 MIR2861-201ENST00000636310 90 ntBASIC19.75■□□□□ 0.75
CACNA1EQ15878 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CACNA1EQ15878 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 AC233723.2-201ENST00000623798 2106 ntBASIC19.75■□□□□ 0.75
CACNA1EQ15878 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 GUSBP5-202ENST00000510805 1989 ntBASIC19.75■□□□□ 0.75
CACNA1EQ15878 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CACNA1EQ15878 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CACNA1EQ15878 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.74■□□□□ 0.75
CACNA1EQ15878 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.74■□□□□ 0.75
CACNA1EQ15878 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 MMP23A-201ENST00000234610 1017 ntBASIC19.74■□□□□ 0.75
CACNA1EQ15878 UNC93B2-201ENST00000285383 730 ntBASIC19.74■□□□□ 0.75
CACNA1EQ15878 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CACNA1EQ15878 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.74■□□□□ 0.75
CACNA1EQ15878 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.74■□□□□ 0.75
CACNA1EQ15878 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 NIFKP9-201ENST00000419265 221 ntBASIC19.74■□□□□ 0.75
CACNA1EQ15878 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.74■□□□□ 0.75
CACNA1EQ15878 KRT18P22-201ENST00000402024 1347 ntBASIC19.74■□□□□ 0.75
CACNA1EQ15878 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CACNA1EQ15878 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1EQ15878 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1EQ15878 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1EQ15878 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 AC073508.3-201ENST00000619697 1419 ntBASIC19.72■□□□□ 0.75
CACNA1EQ15878 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1EQ15878 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CACNA1EQ15878 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1EQ15878 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 KSR1P1-201ENST00000446298 240 ntBASIC19.71■□□□□ 0.75
CACNA1EQ15878 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1EQ15878 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 AC026271.3-201ENST00000571884 352 ntBASIC19.71■□□□□ 0.75
CACNA1EQ15878 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1EQ15878 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA1EQ15878 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1EQ15878 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1EQ15878 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1EQ15878 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1EQ15878 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA1EQ15878 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CACNA1EQ15878 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA1EQ15878 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.7■□□□□ 0.74
CACNA1EQ15878 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1EQ15878 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1EQ15878 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1EQ15878 CYP2D8P-201ENST00000433633 1490 ntBASIC19.7■□□□□ 0.74
CACNA1EQ15878 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms