Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YPL185WYPL185W 396 nt1.52□□□□□ -2.17
RUP1Q12242 HMI1YOL095C 2121 nt1.52□□□□□ -2.17
RUP1Q12242 SPO23YBR250W 1572 nt1.51□□□□□ -2.17
RUP1Q12242 MAK10YEL053C 2202 nt1.51□□□□□ -2.17
RUP1Q12242 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
RUP1Q12242 YJL022WYJL022W 309 nt1.51□□□□□ -2.17
RUP1Q12242 YKL202WYKL202W 582 nt1.51□□□□□ -2.17
RUP1Q12242 YLR146W-AYLR146W-A 189 nt1.51□□□□□ -2.17
RUP1Q12242 SKI3YPR189W 4299 nt1.51□□□□□ -2.17
RUP1Q12242 KIP1YBL063W 3336 nt1.51□□□□□ -2.17
RUP1Q12242 LYS14YDR034C 2373 nt1.5□□□□□ -2.17
RUP1Q12242 PCF11YDR228C 1881 nt1.5□□□□□ -2.17
RUP1Q12242 ADR1YDR216W 3972 nt1.5□□□□□ -2.17
RUP1Q12242 YOR019WYOR019W 2193 nt1.5□□□□□ -2.17
RUP1Q12242 CYC7YEL039C 342 nt1.5□□□□□ -2.17
RUP1Q12242 YLR154W-FYLR154W-F 141 nt1.5□□□□□ -2.17
RUP1Q12242 YMR230W-AYMR230W-A 189 nt1.5□□□□□ -2.17
RUP1Q12242 KCS1YDR017C 3153 nt1.5□□□□□ -2.17
RUP1Q12242 RPS27AYKL156W 249 nt1.49□□□□□ -2.17
RUP1Q12242 YMR001C-AYMR001C-A 231 nt1.49□□□□□ -2.17
RUP1Q12242 ISF1YMR081C 1017 nt1.49□□□□□ -2.17
RUP1Q12242 RPL9BYNL067W 576 nt1.49□□□□□ -2.17
RUP1Q12242 HHT1YBR010W 411 nt1.49□□□□□ -2.17
RUP1Q12242 SMC4YLR086W 4257 nt1.49□□□□□ -2.17
RUP1Q12242 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
RUP1Q12242 RTR1YER139C 681 nt1.48□□□□□ -2.17
RUP1Q12242 YKL083WYKL083W 615 nt1.48□□□□□ -2.17
RUP1Q12242 SFB2YNL049C 2631 nt1.48□□□□□ -2.17
RUP1Q12242 DCP2YNL118C 2913 nt1.47□□□□□ -2.17
RUP1Q12242 POL5YEL055C 3069 nt1.47□□□□□ -2.17
RUP1Q12242 ZIP1YDR285W 2628 nt1.47□□□□□ -2.17
RUP1Q12242 PAU2YEL049W 363 nt1.47□□□□□ -2.17
RUP1Q12242 YHL037CYHL037C 402 nt1.47□□□□□ -2.17
RUP1Q12242 YOR053WYOR053W 342 nt1.47□□□□□ -2.17
RUP1Q12242 ALK1YGL021W 2283 nt1.47□□□□□ -2.17
RUP1Q12242 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
RUP1Q12242 PIK1YNL267W 3201 nt1.46□□□□□ -2.18
RUP1Q12242 TRM732YMR259C 4263 nt1.46□□□□□ -2.18
RUP1Q12242 YER137W-AYER137W-A 306 nt1.46□□□□□ -2.18
RUP1Q12242 YFL019CYFL019C 354 nt1.46□□□□□ -2.18
RUP1Q12242 YHL041WYHL041W 450 nt1.46□□□□□ -2.18
RUP1Q12242 YIL102CYIL102C 306 nt1.46□□□□□ -2.18
RUP1Q12242 HIT1YJR055W 495 nt1.46□□□□□ -2.18
RUP1Q12242 COF1YLL050C 432 nt1.46□□□□□ -2.18
RUP1Q12242 SPO24YPR036W-A 204 nt1.46□□□□□ -2.18
RUP1Q12242 AIM9YER080W 1884 nt1.46□□□□□ -2.18
RUP1Q12242 MLH3YPL164C 2148 nt1.45□□□□□ -2.18
RUP1Q12242 BSC3YLR465C 309 nt1.45□□□□□ -2.18
RUP1Q12242 CTF4YPR135W 2784 nt1.45□□□□□ -2.18
RUP1Q12242 NUP192YJL039C 5052 nt1.45□□□□□ -2.18
RUP1Q12242 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
RUP1Q12242 RFX1YLR176C 2436 nt1.44□□□□□ -2.18
RUP1Q12242 SWI6YLR182W 2412 nt1.44□□□□□ -2.18
RUP1Q12242 YML003WYML003W 873 nt1.44□□□□□ -2.18
RUP1Q12242 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
RUP1Q12242 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
RUP1Q12242 YLL032CYLL032C 2478 nt1.43□□□□□ -2.18
RUP1Q12242 KAP122YGL016W 3246 nt1.43□□□□□ -2.18
RUP1Q12242 YDR157WYDR157W 402 nt1.43□□□□□ -2.18
RUP1Q12242 YDR182W-AYDR182W-A 204 nt1.43□□□□□ -2.18
RUP1Q12242 YIL059CYIL059C 366 nt1.43□□□□□ -2.18
RUP1Q12242 MRPL31YKL138C 396 nt1.43□□□□□ -2.18
RUP1Q12242 YLR140WYLR140W 327 nt1.43□□□□□ -2.18
RUP1Q12242 YPL229WYPL229W 621 nt1.43□□□□□ -2.18
RUP1Q12242 MVP1YMR004W 1536 nt1.43□□□□□ -2.18
RUP1Q12242 DGR2YKL121W 2559 nt1.43□□□□□ -2.18
RUP1Q12242 RAD50YNL250W 3939 nt1.42□□□□□ -2.18
RUP1Q12242 EFR3YMR212C 2349 nt1.42□□□□□ -2.18
RUP1Q12242 PFD1YJL179W 330 nt1.42□□□□□ -2.18
RUP1Q12242 RPL40BYKR094C 387 nt1.42□□□□□ -2.18
RUP1Q12242 UPS1YLR193C 528 nt1.42□□□□□ -2.18
RUP1Q12242 AI5_ALPHAQ0070 1893 nt1.41□□□□□ -2.18
RUP1Q12242 CHS1YNL192W 3396 nt1.41□□□□□ -2.18
RUP1Q12242 YDR118W-AYDR118W-A 117 nt1.41□□□□□ -2.18
RUP1Q12242 YAL068W-AYAL068W-A 255 nt1.41□□□□□ -2.18
RUP1Q12242 CDC31YOR257W 486 nt1.41□□□□□ -2.18
RUP1Q12242 NUT2YPR168W 474 nt1.41□□□□□ -2.18
RUP1Q12242 BST1YFL025C 3090 nt1.41□□□□□ -2.18
RUP1Q12242 PIG1YLR273C 1947 nt1.4□□□□□ -2.18
RUP1Q12242 ENV11YGR071C 2583 nt1.4□□□□□ -2.19
RUP1Q12242 PAC1YOR269W 1485 nt1.4□□□□□ -2.19
RUP1Q12242 YGL217CYGL217C 342 nt1.4□□□□□ -2.19
RUP1Q12242 ANS1YHR126C 480 nt1.4□□□□□ -2.19
RUP1Q12242 EMC5YIL027C 426 nt1.4□□□□□ -2.19
RUP1Q12242 UFD2YDL190C 2886 nt1.4□□□□□ -2.19
RUP1Q12242 YGR174W-AYGR174W-A 87 nt1.39□□□□□ -2.19
RUP1Q12242 VPS55YJR044C 423 nt1.39□□□□□ -2.19
RUP1Q12242 snR14snR14 160 nt1.39□□□□□ -2.19
RUP1Q12242 YOR376WYOR376W 369 nt1.39□□□□□ -2.19
RUP1Q12242 NCA2YPR155C 1851 nt1.39□□□□□ -2.19
RUP1Q12242 SEC5YDR166C 2916 nt1.39□□□□□ -2.19
RUP1Q12242 SLX4YLR135W 2247 nt1.38□□□□□ -2.19
RUP1Q12242 YOR121CYOR121C 306 nt1.38□□□□□ -2.19
RUP1Q12242 YJL135WYJL135W 318 nt1.37□□□□□ -2.19
RUP1Q12242 SDH2YLL041C 801 nt1.37□□□□□ -2.19
RUP1Q12242 TIM18YOR297C 579 nt1.37□□□□□ -2.19
RUP1Q12242 AHC1YOR023C 1701 nt1.37□□□□□ -2.19
RUP1Q12242 snR72snR72 98 nt1.36□□□□□ -2.19
RUP1Q12242 ATG31YDR022C 591 nt1.36□□□□□ -2.19
RUP1Q12242 YMR175W-AYMR175W-A 195 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms