Protein–RNA interactions for Protein: Q05775

HCR1, Eukaryotic translation initiation factor 3 subunit J, yeastyeast

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCR1Q05775 TRM3YDL112W 4311 nt1.9□□□□□ -2.11
HCR1Q05775 YPR097WYPR097W 3222 nt1.89□□□□□ -2.11
HCR1Q05775 GRR1YJR090C 3456 nt1.89□□□□□ -2.11
HCR1Q05775 DBP6YNR038W 1890 nt1.89□□□□□ -2.11
HCR1Q05775 HMRA2YCR096C 360 nt1.89□□□□□ -2.11
HCR1Q05775 YIL059CYIL059C 366 nt1.89□□□□□ -2.11
HCR1Q05775 YMR290W-AYMR290W-A 348 nt1.89□□□□□ -2.11
HCR1Q05775 snR51snR51 107 nt1.89□□□□□ -2.11
HCR1Q05775 SXM1YDR395W 2835 nt1.89□□□□□ -2.11
HCR1Q05775 SBE22YHR103W 2559 nt1.89□□□□□ -2.11
HCR1Q05775 UPS1YLR193C 528 nt1.88□□□□□ -2.11
HCR1Q05775 YMR141W-AYMR141W-A 225 nt1.88□□□□□ -2.11
HCR1Q05775 HOP2YGL033W 657 nt1.87□□□□□ -2.11
HCR1Q05775 PAU8YAL068C 363 nt1.87□□□□□ -2.11
HCR1Q05775 PAU20YOL161C 363 nt1.87□□□□□ -2.11
HCR1Q05775 RGA2YDR379W 3030 nt1.87□□□□□ -2.11
HCR1Q05775 NOP53YPL146C 1368 nt1.86□□□□□ -2.11
HCR1Q05775 YDR426CYDR426C 378 nt1.86□□□□□ -2.11
HCR1Q05775 CYC7YEL039C 342 nt1.86□□□□□ -2.11
HCR1Q05775 YGR069WYGR069W 336 nt1.86□□□□□ -2.11
HCR1Q05775 EFR3YMR212C 2349 nt1.86□□□□□ -2.11
HCR1Q05775 CFT1YDR301W 4074 nt1.85□□□□□ -2.11
HCR1Q05775 OST1YJL002C 1431 nt1.85□□□□□ -2.11
HCR1Q05775 YHR063W-AYHR063W-A 336 nt1.85□□□□□ -2.11
HCR1Q05775 YJL135WYJL135W 318 nt1.85□□□□□ -2.11
HCR1Q05775 YOR333CYOR333C 417 nt1.85□□□□□ -2.11
HCR1Q05775 SLM1YIL105C 2061 nt1.85□□□□□ -2.11
HCR1Q05775 CDC60YPL160W 3273 nt1.85□□□□□ -2.11
HCR1Q05775 SEY1YOR165W 2331 nt1.85□□□□□ -2.11
HCR1Q05775 OSH6YKR003W 1347 nt1.85□□□□□ -2.11
HCR1Q05775 PET309YLR067C 2898 nt1.84□□□□□ -2.11
HCR1Q05775 SWI5YDR146C 2130 nt1.84□□□□□ -2.11
HCR1Q05775 YJL015CYJL015C 285 nt1.84□□□□□ -2.11
HCR1Q05775 RPS17AYML024W 411 nt1.84□□□□□ -2.11
HCR1Q05775 AGC1YPR021C 2709 nt1.82□□□□□ -2.12
HCR1Q05775 YHR073W-AYHR073W-A 177 nt1.82□□□□□ -2.12
HCR1Q05775 YHR210CYHR210C 1026 nt1.82□□□□□ -2.12
HCR1Q05775 YIL032CYIL032C 357 nt1.82□□□□□ -2.12
HCR1Q05775 MCM22YJR135C 720 nt1.82□□□□□ -2.12
HCR1Q05775 YNL114CYNL114C 372 nt1.82□□□□□ -2.12
HCR1Q05775 HHT1YBR010W 411 nt1.82□□□□□ -2.12
HCR1Q05775 YPL152W-AYPL152W-A 99 nt1.82□□□□□ -2.12
HCR1Q05775 YOP1YPR028W 543 nt1.82□□□□□ -2.12
HCR1Q05775 CDC53YDL132W 2448 nt1.82□□□□□ -2.12
HCR1Q05775 LRE1YCL051W 1752 nt1.82□□□□□ -2.12
HCR1Q05775 PXA2YKL188C 2562 nt1.81□□□□□ -2.12
HCR1Q05775 YDL062WYDL062W 426 nt1.81□□□□□ -2.12
HCR1Q05775 NUT2YPR168W 474 nt1.81□□□□□ -2.12
HCR1Q05775 RIM20YOR275C 1986 nt1.81□□□□□ -2.12
HCR1Q05775 PIP2YOR363C 2991 nt1.8□□□□□ -2.12
HCR1Q05775 CFT2YLR115W 2580 nt1.8□□□□□ -2.12
HCR1Q05775 snR60snR60 104 nt1.8□□□□□ -2.12
HCR1Q05775 NPC2YDL046W 522 nt1.8□□□□□ -2.12
HCR1Q05775 YIL102CYIL102C 306 nt1.8□□□□□ -2.12
HCR1Q05775 YLR146W-AYLR146W-A 189 nt1.8□□□□□ -2.12
HCR1Q05775 YML007C-AYML007C-A 111 nt1.8□□□□□ -2.12
HCR1Q05775 RPB10YOR210W 213 nt1.8□□□□□ -2.12
HCR1Q05775 YCL046WYCL046W 324 nt1.8□□□□□ -2.12
HCR1Q05775 CHS1YNL192W 3396 nt1.8□□□□□ -2.12
HCR1Q05775 MNE1YOR350C 1992 nt1.79□□□□□ -2.12
HCR1Q05775 SWI6YLR182W 2412 nt1.79□□□□□ -2.12
HCR1Q05775 TRL1YJL087C 2484 nt1.79□□□□□ -2.12
HCR1Q05775 UTP21YLR409C 2820 nt1.79□□□□□ -2.12
HCR1Q05775 HTL1YCR020W-B 237 nt1.79□□□□□ -2.12
HCR1Q05775 PCC1YKR095W-A 267 nt1.79□□□□□ -2.12
HCR1Q05775 YLR053CYLR053C 327 nt1.79□□□□□ -2.12
HCR1Q05775 TMA7YLR262C-A 195 nt1.79□□□□□ -2.12
HCR1Q05775 VPS15YBR097W 4365 nt1.79□□□□□ -2.12
HCR1Q05775 RAD61YDR014W 1944 nt1.78□□□□□ -2.12
HCR1Q05775 SSK2YNR031C 4740 nt1.78□□□□□ -2.12
HCR1Q05775 YDR286CYDR286C 345 nt1.78□□□□□ -2.12
HCR1Q05775 YDR344CYDR344C 444 nt1.78□□□□□ -2.12
HCR1Q05775 YKL183C-AYKL183C-A 213 nt1.78□□□□□ -2.12
HCR1Q05775 IST2YBR086C 2841 nt1.78□□□□□ -2.12
HCR1Q05775 MSH6YDR097C 3729 nt1.78□□□□□ -2.13
HCR1Q05775 YDR341CYDR341C 1824 nt1.77□□□□□ -2.13
HCR1Q05775 YCR043CYCR043C 384 nt1.77□□□□□ -2.13
HCR1Q05775 YDL211CYDL211C 1119 nt1.77□□□□□ -2.13
HCR1Q05775 YGL041CYGL041C 204 nt1.77□□□□□ -2.13
HCR1Q05775 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
HCR1Q05775 PAU18YLL064C 363 nt1.77□□□□□ -2.13
HCR1Q05775 PAU6YNR076W 363 nt1.77□□□□□ -2.13
HCR1Q05775 RPH1YER169W 2391 nt1.77□□□□□ -2.13
HCR1Q05775 YGR250CYGR250C 2346 nt1.77□□□□□ -2.13
HCR1Q05775 MVP1YMR004W 1536 nt1.76□□□□□ -2.13
HCR1Q05775 SRP14YDL092W 441 nt1.76□□□□□ -2.13
HCR1Q05775 snR80snR80 171 nt1.76□□□□□ -2.13
HCR1Q05775 YKR075W-AYKR075W-A 270 nt1.76□□□□□ -2.13
HCR1Q05775 YPR002C-AYPR002C-A 198 nt1.76□□□□□ -2.13
HCR1Q05775 MGA2YIR033W 3342 nt1.76□□□□□ -2.13
HCR1Q05775 snR72snR72 98 nt1.75□□□□□ -2.13
HCR1Q05775 SDH2YLL041C 801 nt1.75□□□□□ -2.13
HCR1Q05775 YLR154W-AYLR154W-A 186 nt1.75□□□□□ -2.13
HCR1Q05775 RPL38YLR325C 237 nt1.75□□□□□ -2.13
HCR1Q05775 YMR247W-AYMR247W-A 144 nt1.75□□□□□ -2.13
HCR1Q05775 LHS1YKL073W 2646 nt1.75□□□□□ -2.13
HCR1Q05775 YGL188C-AYGL188C-A 141 nt1.74□□□□□ -2.13
HCR1Q05775 YHL042WYHL042W 453 nt1.74□□□□□ -2.13
HCR1Q05775 PDR8YLR266C 2106 nt1.74□□□□□ -2.13
HCR1Q05775 COA6YMR244C-A 315 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 6.5 ms