Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS1Q01581 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 MFSD11-216ENST00000590393 1141 ntBASIC19.42■□□□□ 0.7
HMGCS1Q01581 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS1Q01581 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS1Q01581 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS1Q01581 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 CYP21A1P-202ENST00000354927 1481 ntBASIC19.41■□□□□ 0.7
HMGCS1Q01581 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 KRT18P11-201ENST00000435214 1283 ntBASIC19.41■□□□□ 0.7
HMGCS1Q01581 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 AL356652.1-201ENST00000615962 565 ntBASIC19.41■□□□□ 0.7
HMGCS1Q01581 AC013268.1-206ENST00000638368 961 ntBASIC19.41■□□□□ 0.7
HMGCS1Q01581 AC112229.1-201ENST00000639295 961 ntBASIC19.41■□□□□ 0.7
HMGCS1Q01581 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 AC087633.2-202ENST00000565166 1439 ntBASIC19.41■□□□□ 0.7
HMGCS1Q01581 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS1Q01581 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS1Q01581 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HMGCS1Q01581 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS1Q01581 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGCS1Q01581 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.39■□□□□ 0.7
HMGCS1Q01581 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGCS1Q01581 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HMGCS1Q01581 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.39■□□□□ 0.7
HMGCS1Q01581 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HMGCS1Q01581 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 AC016769.1-201ENST00000409132 1010 ntBASIC19.39■□□□□ 0.69
HMGCS1Q01581 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGCS1Q01581 AC007322.4-201ENST00000509611 723 ntBASIC19.39■□□□□ 0.69
HMGCS1Q01581 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
HMGCS1Q01581 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.39■□□□□ 0.69
HMGCS1Q01581 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS1Q01581 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS1Q01581 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.39■□□□□ 0.69
HMGCS1Q01581 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGCS1Q01581 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS1Q01581 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
HMGCS1Q01581 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms