Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL121829.2-201ENST00000620908 328 ntBASIC19.24■□□□□ 0.67
GABREP78334 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GABREP78334 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.24■□□□□ 0.67
GABREP78334 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.24■□□□□ 0.67
GABREP78334 LINC00565-201ENST00000562710 2331 ntBASIC19.24■□□□□ 0.67
GABREP78334 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.23■□□□□ 0.67
GABREP78334 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.23■□□□□ 0.67
GABREP78334 MIR6786-201ENST00000616843 113 ntBASIC19.23■□□□□ 0.67
GABREP78334 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.23■□□□□ 0.67
GABREP78334 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.23■□□□□ 0.67
GABREP78334 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.23■□□□□ 0.67
GABREP78334 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.23■□□□□ 0.67
GABREP78334 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.23■□□□□ 0.67
GABREP78334 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GABREP78334 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
GABREP78334 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.23■□□□□ 0.67
GABREP78334 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABREP78334 NBPF21P-201ENST00000425093 1451 ntBASIC19.22■□□□□ 0.67
GABREP78334 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABREP78334 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABREP78334 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABREP78334 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.22■□□□□ 0.67
GABREP78334 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GABREP78334 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GABREP78334 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GABREP78334 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.22■□□□□ 0.67
GABREP78334 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 AL590326.2-201ENST00000625139 305 ntBASIC19.22■□□□□ 0.67
GABREP78334 AC092865.7-201ENST00000641832 219 ntBASIC19.22■□□□□ 0.67
GABREP78334 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABREP78334 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.22■□□□□ 0.67
GABREP78334 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABREP78334 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABREP78334 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.22■□□□□ 0.67
GABREP78334 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.21■□□□□ 0.67
GABREP78334 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GABREP78334 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GABREP78334 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
GABREP78334 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.21■□□□□ 0.67
GABREP78334 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.21■□□□□ 0.67
GABREP78334 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.21■□□□□ 0.67
GABREP78334 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.21■□□□□ 0.67
GABREP78334 AC145285.6-201ENST00000604632 637 ntBASIC19.21■□□□□ 0.67
GABREP78334 AC005363.2-201ENST00000618631 242 ntBASIC19.21■□□□□ 0.67
GABREP78334 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.21■□□□□ 0.67
GABREP78334 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABREP78334 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GABREP78334 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.2■□□□□ 0.66
GABREP78334 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.2■□□□□ 0.66
GABREP78334 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 AC073195.1-201ENST00000607241 877 ntBASIC19.2■□□□□ 0.66
GABREP78334 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.2■□□□□ 0.66
GABREP78334 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GABREP78334 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.2■□□□□ 0.66
GABREP78334 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.2■□□□□ 0.66
GABREP78334 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GABREP78334 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.19■□□□□ 0.66
GABREP78334 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.19■□□□□ 0.66
GABREP78334 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms