Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA4AP68366 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TUBA4AP68366 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
TUBA4AP68366 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBA4AP68366 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TUBA4AP68366 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TUBA4AP68366 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBA4AP68366 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.86■□□□□ 0.61
TUBA4AP68366 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TUBA4AP68366 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TUBA4AP68366 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TUBA4AP68366 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TUBA4AP68366 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TUBA4AP68366 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA4AP68366 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TUBA4AP68366 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA4AP68366 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TUBA4AP68366 AC027612.3-201ENST00000413684 1047 ntBASIC18.85■□□□□ 0.61
TUBA4AP68366 AC026271.2-201ENST00000428091 497 ntBASIC18.85■□□□□ 0.61
TUBA4AP68366 AC087623.3-201ENST00000607047 1098 ntBASIC18.85■□□□□ 0.61
TUBA4AP68366 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA4AP68366 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBA4AP68366 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA4AP68366 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.85■□□□□ 0.61
TUBA4AP68366 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TUBA4AP68366 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA4AP68366 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBA4AP68366 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBA4AP68366 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TUBA4AP68366 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TUBA4AP68366 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBA4AP68366 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBA4AP68366 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TUBA4AP68366 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TUBA4AP68366 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TUBA4AP68366 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 BX005040.4-201ENST00000637145 1518 ntBASIC18.84■□□□□ 0.61
TUBA4AP68366 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBA4AP68366 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA4AP68366 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.83■□□□□ 0.61
TUBA4AP68366 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.83■□□□□ 0.61
TUBA4AP68366 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA4AP68366 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA4AP68366 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBA4AP68366 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBA4AP68366 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TUBA4AP68366 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.83■□□□□ 0.6
TUBA4AP68366 YBX1P1-201ENST00000445822 960 ntBASIC18.83■□□□□ 0.6
TUBA4AP68366 AL034346.1-201ENST00000568244 1277 ntBASIC18.83■□□□□ 0.6
TUBA4AP68366 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA4AP68366 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBA4AP68366 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA4AP68366 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBA4AP68366 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBA4AP68366 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA4AP68366 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA4AP68366 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA4AP68366 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBA4AP68366 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA4AP68366 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TUBA4AP68366 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA4AP68366 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA4AP68366 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA4AP68366 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TUBA4AP68366 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBA4AP68366 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBA4AP68366 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA4AP68366 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBA4AP68366 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.82■□□□□ 0.6
TUBA4AP68366 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms