Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RPS28P62857 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RPS28P62857 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC11.79□□□□□ -0.52
RPS28P62857 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.79□□□□□ -0.52
RPS28P62857 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RPS28P62857 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.79□□□□□ -0.52
RPS28P62857 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RPS28P62857 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 AC067852.2-201ENST00000590513 2313 ntBASIC11.78□□□□□ -0.52
RPS28P62857 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC11.78□□□□□ -0.52
RPS28P62857 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.78□□□□□ -0.52
RPS28P62857 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPS28P62857 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RPS28P62857 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC11.77□□□□□ -0.52
RPS28P62857 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPS28P62857 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
RPS28P62857 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPS28P62857 AL162377.1-201ENST00000618844 1793 ntBASIC11.77□□□□□ -0.52
RPS28P62857 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPS28P62857 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
RPS28P62857 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPS28P62857 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPS28P62857 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.77□□□□□ -0.52
RPS28P62857 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.77□□□□□ -0.53
RPS28P62857 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.77□□□□□ -0.53
RPS28P62857 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 MVK-208ENST00000539696 608 ntTSL 5 BASIC11.77□□□□□ -0.53
RPS28P62857 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RPS28P62857 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RPS28P62857 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.77□□□□□ -0.53
RPS28P62857 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RPS28P62857 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPS28P62857 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RPS28P62857 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
RPS28P62857 BICD1-207ENST00000551848 1962 ntBASIC11.76□□□□□ -0.53
RPS28P62857 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RPS28P62857 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC11.76□□□□□ -0.53
RPS28P62857 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPS28P62857 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms