Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4XP62701 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.22■□□□□ 0.51
RPS4XP62701 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RPS4XP62701 CYP21A1P-202ENST00000354927 1481 ntBASIC18.21■□□□□ 0.51
RPS4XP62701 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RPS4XP62701 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4XP62701 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4XP62701 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.21■□□□□ 0.51
RPS4XP62701 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4XP62701 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.21■□□□□ 0.51
RPS4XP62701 AL356652.1-201ENST00000615962 565 ntBASIC18.21■□□□□ 0.51
RPS4XP62701 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4XP62701 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.21■□□□□ 0.51
RPS4XP62701 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4XP62701 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RPS4XP62701 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
RPS4XP62701 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.21■□□□□ 0.5
RPS4XP62701 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.2■□□□□ 0.5
RPS4XP62701 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.2■□□□□ 0.5
RPS4XP62701 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.2■□□□□ 0.5
RPS4XP62701 AC016405.3-201ENST00000607710 860 ntBASIC18.2■□□□□ 0.5
RPS4XP62701 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RPS4XP62701 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.2■□□□□ 0.5
RPS4XP62701 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.2■□□□□ 0.5
RPS4XP62701 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4XP62701 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
RPS4XP62701 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RPS4XP62701 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.19■□□□□ 0.5
RPS4XP62701 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
RPS4XP62701 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RPS4XP62701 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.19■□□□□ 0.5
RPS4XP62701 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 AF201337.1-201ENST00000520239 748 ntBASIC18.19■□□□□ 0.5
RPS4XP62701 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.19■□□□□ 0.5
RPS4XP62701 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.19■□□□□ 0.5
RPS4XP62701 TMEM191A-211ENST00000637163 1067 ntBASIC18.19■□□□□ 0.5
RPS4XP62701 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RPS4XP62701 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.19■□□□□ 0.5
RPS4XP62701 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.19■□□□□ 0.5
RPS4XP62701 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.19■□□□□ 0.5
RPS4XP62701 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RPS4XP62701 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4XP62701 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RPS4XP62701 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
RPS4XP62701 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.18■□□□□ 0.5
RPS4XP62701 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms