Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
EIF3EP60228 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.8■□□□□ 0.92
EIF3EP60228 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.8■□□□□ 0.92
EIF3EP60228 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.8■□□□□ 0.92
EIF3EP60228 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EIF3EP60228 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
EIF3EP60228 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.8■□□□□ 0.92
EIF3EP60228 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.8■□□□□ 0.92
EIF3EP60228 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
EIF3EP60228 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3EP60228 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.79■□□□□ 0.92
EIF3EP60228 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.79■□□□□ 0.92
EIF3EP60228 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
EIF3EP60228 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.79■□□□□ 0.92
EIF3EP60228 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.79■□□□□ 0.92
EIF3EP60228 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.79■□□□□ 0.92
EIF3EP60228 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
EIF3EP60228 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.79■□□□□ 0.92
EIF3EP60228 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.79■□□□□ 0.92
EIF3EP60228 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3EP60228 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
EIF3EP60228 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.78■□□□□ 0.92
EIF3EP60228 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
EIF3EP60228 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.78■□□□□ 0.92
EIF3EP60228 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
EIF3EP60228 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
EIF3EP60228 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3EP60228 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.78■□□□□ 0.92
EIF3EP60228 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.78■□□□□ 0.92
EIF3EP60228 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3EP60228 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3EP60228 DUX4L16-201ENST00000555130 1264 ntBASIC20.78■□□□□ 0.92
EIF3EP60228 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.78■□□□□ 0.92
EIF3EP60228 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
EIF3EP60228 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3EP60228 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3EP60228 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
EIF3EP60228 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3EP60228 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
EIF3EP60228 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.77■□□□□ 0.92
EIF3EP60228 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3EP60228 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3EP60228 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3EP60228 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
EIF3EP60228 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
EIF3EP60228 CNN2P6-201ENST00000439038 900 ntBASIC20.77■□□□□ 0.92
EIF3EP60228 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.77■□□□□ 0.92
EIF3EP60228 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.77■□□□□ 0.92
EIF3EP60228 AC011767.1-201ENST00000617410 1153 ntBASIC20.77■□□□□ 0.92
EIF3EP60228 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3EP60228 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EIF3EP60228 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.77■□□□□ 0.92
EIF3EP60228 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EIF3EP60228 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
EIF3EP60228 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EIF3EP60228 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.76■□□□□ 0.91
EIF3EP60228 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EIF3EP60228 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 AC006015.1-201ENST00000429970 570 ntBASIC20.76■□□□□ 0.91
EIF3EP60228 RARRES2P4-201ENST00000514074 484 ntBASIC20.76■□□□□ 0.91
EIF3EP60228 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms